Sample code for working with the BioGRID REST Service API in Python
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Sep 13, 2020 - Python
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biogrid
Here are 10 public repositories matching this topic...
Python client for the BioGRID webservice
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Oct 16, 2016 - Jupyter Notebook
💻 A unified bioinformatics tool for exploring evolutionarily conserved 🧬 proteins across model organisms. Combines multi-database ortholog search with Gene Ontology annotation extension. 🎓 PhD project, King's College London (2013-2019).
bioinformatics biogrid uniprot homologene geneontology orthomcl orthologs homology eggnog drosophila-melanogaster homo-sapiens kings-college-london danio-rerio caenorhabditis-elegans orthology-relationships inparanoid arabidopsis-thaliana saccharomyces-cerevisiae orthologous-genes schizosaccharomyces-pombe
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Mar 16, 2026 - PHP
BioGRID C-UP (CRISPR Upload) LIMS System
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Nov 6, 2024 - PHP
Predicting and categorizing physical interactions between Hippo and actin pathway proteins using graph neural networks.
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Aug 18, 2026 - Python
Orthologs Databases — Archive of bioinformatics databases and PHP processing pipelines for cross-species ortholog analysis across 7 model organisms (2012-2016). Integrates data from 21 sources including HomoloGene, InParanoid, OrthoMCL, eggNOG, BioGRID, STRING, Gene Ontology, KEGG, and Reactome.
php string databases biogrid biomart homologene flybase geneontology orthomcl kegg-ortholog orthologs orthology homology eggnog mitocheck inparanoid eggnog-mapper pombase signalink
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Mar 15, 2026 - PHP
A simple script to take the Biorxiv Coronavirus Collection and Triage it for interaction terms
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Sep 9, 2020 - Python
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