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plot_lineage_defs() doesn't apply colours if all mutations match

Status: Open.

#53 In DGBeckerLab/provoc;

· DBecker7 opened on May 21, 2024

Simplify the array of plotting functions.

Status: Open.

#52 In DGBeckerLab/provoc;

· DBecker7 opened on Apr 15, 2024

Plotting functions should return the data in a plot friendly format.

Status: Open.

#51 In DGBeckerLab/provoc;

· DBecker7 opened on Apr 14, 2024

plot.provoc should plot a time series if date_col specified.

Status: Open.

#45 In DGBeckerLab/provoc;

· DBecker7 opened on Apr 9, 2024

Superfunction to run different model specs

Status: Open.

#42 In DGBeckerLab/provoc;

· DBecker7 opened on Apr 5, 2024

preliminary feedback

Status: Open.

#40 In DGBeckerLab/provoc;

· davidchampredon opened on Mar 26, 2024

predict.provoc to work with new data

Status: Open.

#34 In DGBeckerLab/provoc;

· danerkestey opened on Mar 22, 2024

Similarity of Variants (before and after data)

Status: Open.

#26 In DGBeckerLab/provoc;

· DBecker7 opened on Mar 11, 2024

Gather more variant definitions and helper functions

Status: Open.

#24 In DGBeckerLab/provoc;

· DBecker7 opened on Mar 1, 2024

Investigate the effect of changes to the variant matrix (variable importance measures)

Status: Open.

#17 In DGBeckerLab/provoc;

· DBecker7 opened on Dec 30, 2023

Investigate the usefulness of GLM standard errors

Status: Open.

#16 In DGBeckerLab/provoc;

· DBecker7 opened on Dec 30, 2023

Implement simple versions of Freyja and/or Alcov for comparison

Low Priority

Status: Open.

#12 In DGBeckerLab/provoc;

· DBecker7 opened on Dec 29, 2023