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feat(deps): update Virtool to 41.15.0 - #207

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igboyes merged 1 commit into
virtool:mainfrom
ReeceHoffmann:reecehoffmann/vir-2936-update-pathoscope-to-virtool-41150
Aug 10, 2026
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feat(deps): update Virtool to 41.15.0#207
igboyes merged 1 commit into
virtool:mainfrom
ReeceHoffmann:reecehoffmann/vir-2936-update-pathoscope-to-virtool-41150

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Summary

  • pin Virtool 41.15.0 and regenerate the dependency lockfile
  • adapt OTU summary lookups and SQLite reference creation to the new interfaces
  • preserve candidate isolate indexing and reassignment metadata with focused coverage

Verification

  • mise run test: 33 Rust tests and 41 Python tests passed
  • Ruff formatting and lint checks passed

Linear: VIR-2936

- adapt OTU lookups and SQLite index creation to the 41.15.0 interfaces
- preserve candidate indexing and reassignment metadata with focused coverage
@ReeceHoffmann
ReeceHoffmann requested a review from igboyes as a code owner August 10, 2026 21:45
@igboyes
igboyes merged commit 535aed4 into virtool:main Aug 10, 2026
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🎉 This PR is included in version 5.20.0 🎉

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