rhizosphere

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EMSL-Computing / RhizoAI

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AI-ready datasets and workflows for rhizosphere imaging and root classification using OCT, XCT, and machine learning

python machine-learning optical-coherence-tomography xct rhizosphere root-classification coastal-wetlands

Updated May 31, 2026
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delaney-beals / poplar-endosphere-colonization

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🌱 Strain-resolved metagenomics and comparative genomics of root-associated Variovorax bacterial isolates (Beals & Carper et al. 2026).

metagenomics comparative-genomics plant-microbe-interactions rhizosphere

Updated Jun 16, 2026
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mxd2026-gif / Sophora_moorcroftiana_Rhizosphere_Endophytic_Microbiome_R_Scripts

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Full standardized serial R pipeline (scripts 01~21) for rhizosphere & root endophytic multi-omics microbiome statistical and functional pathway analysis of Sophora moorcroftiana. Release v1.0.0 for paper reproducibility.

bioinformatics statistical-analysis microbiome kegg-pathway multi-omics r-pipeline rhizosphere endophytic

Updated Jul 19, 2026
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