Absolute solvation free energy calculations with OpenFF and OpenMM
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Updated
Dec 1, 2024 - Python
Absolute solvation free energy calculations with OpenFF and OpenMM
Open-source SBDD toolkit for standardized docking-pose import, restrained OpenMM minimization, pose QC, protein-ligand interaction analysis, ligand strain analysis, and integrated design prioritization. Supports single receptors, but also multichain receptors, molecular glues, and PROTAC ternary complexes.
TOFF: (Topologies from Open Force Fields) is a Python package to get OpenFF, GAFF and Espaloma topologies for MD simulations.
Polymer-Oriented Library Yielding Structure Assignment, Calculation of CHARges, Interchange, and Data Elucidation
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