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medsam2

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PyTorch-based pipeline includes data preprocessing, model inference, and performance evaluation with standard metrics (Dice score, Hausdorff distance). The repository provides tools for visualizing segmentation results and comparing MedSAM-2's performance against baseline models, offering insights into adapting foundation models for medical imaging

  • Updated Jul 5, 2025
  • Jupyter Notebook

Open, modular MCP server for medical image analysis agents: containerized models (MedSAM2, SAM 2.1, TotalSegmentator, lungmask, HD-BET, SynthStrip, nnU-Net, MONAI, TorchXRayVision), preset/custom guidelines, and a code-customizable viewer.

  • Updated Sep 16, 2026
  • Python

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