crop-modelling

Open-source 3D simulator of plants and their environment: functional-structural plant modeling (FSPM), dynamic plant models, ray-traced radiation, photosynthesis, stomatal conductance, energy balance/ET, synthetic auto-annotated LiDAR and camera imagery, and plant digital twins. C++ with a Python API (PyHelios).

Python API for Helios: build 3D virtual plants and canopies, then simulate ray-traced radiation, photosynthesis, stomatal conductance, energy balance/ET, and synthetic LiDAR. pip install pyhelios3d, with prebuilt wheels for Windows, Linux and Apple Silicon macOS.

A simulation model for the digital reconstruction of 3D root system architectures. Integrated with a simulation-based inference generative deep learning model.

This is the source code of ORCHIDEE-CROP model and other related models developed based on ORCHIDEE-CROP model. For installing ORCHIDEE-CROP model, including the calculation environmental setting, please visit: https://forge.ipsl.jussieu.fr/orchidee/wiki/Documentation/UserGuide

Simulation modelling of crop diseases using a Susceptible-Exposed-Infectious-Removed (SEIR) model in R

Assumptions tracking for WOFOST Potato using behaviour-driven development.

What a biostimulant changes inside the leaf, measured

Modelling and Evaluation framework for the Master Thesis "Rooting in Soil and Science: Process-Based Modelling and Uncertainty Quantification of Perennial Wheat Growth in Skane, Sweden" (2026, Lund University)

Python package for Agro-Ecological Zoning (AEZ)