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Functional Stability Theory (FST)

🇬🇧 English Version | 🇩🇪 Deutsche Version

License: CC BY 4.0 Attribution: NOTICE Version CI Contributing Test Suite Python: 3.10--3.13 Platform: Windows | Linux | macOS Zero-Egress Security: Research Integrity Security: RunAsInvoker Security SLA Code style: ruff ORCID: Lukas Geiger Zenodo Spectrum Duality Ecosystem: research-line Umbrella: open-bricks Third-Party Licenses Level 1 SBOM Text Marketing Log LLM Context Audit

Note

AI / LLM Integration & Machine-Readable Context: A machine-readable index for LLMs, search engines, and automated crawlers is maintained in llms.txt. It provides scope boundaries, search phrases, Concept-DOIs, and claim-level disambiguation notes. Local discoverability logs are tracked in MARKETING-LOG.txt.

Functional Stability Theory is a unified mathematical programme that identifies a single structural challenge — Functional Positivity under Gauge Constraint (Pattern A) — as the common substrate of open problems in number theory, mathematical physics, and cosmology.

Quick Navigation

Section Description Target
01. Start Here Overview of primary navigation paths and foundations Jump to Section
02. Discovery Context Search phrases, scholarly indexes, and citation guidelines Jump to Section
03. The Five Masters Core foundation papers and latest Zenodo Concept-DOIs Jump to Section
04. Domain Supplements Math, Physics, Cosmology, Biology, and Chemistry applications Jump to Section
05. Glossary Core terminology (v2.0, NE-A/B, SGE, Weil QW, Pattern A, RFEP) Jump to Section
06. Proof Architecture Five Masters foundation hierarchy (flowchart TD) Jump to Section
07. Theoretical Data Flow Pipeline data flow from axioms to diagnostics (flowchart LR) Jump to Section
08. Numerical Lifecycle Auto-numbered sequence diagram of the validation workflow Jump to Section
09. Governance Invariants 10 runtime & research integrity invariants table Jump to Section
10. ASCII Architecture Textual structural layout of the 5 Masters and domain branches Jump to Section
11. Independent Foundations Second-route RH and CRM cosmology baseline papers Jump to Section
12. Validation Scripts Complete directory and script inventory for numerical replication Jump to Section
13. Repository Structure Complete tree layout of papers, domain folders, and scripts Jump to Section
14. Sibling Ecosystem Cross-linked research-line, open-bricks, and ellmos-ai packages Jump to Section
15. Target Personas Four target scholarly and technical personas and architectural value Jump to Section
16. Comparative Matrix Invariant-mapped benchmark against 4 alternative computing paradigms Jump to Section
17. Third-Party Licenses Supply chain transparency, zero-copyleft audit, and invariant compliance Jump to Section
18. Security Policy & Statutory Notice Vulnerability disclosure SLA, author attribution & § 521 BGB disclaimer Jump to Section

Start Here

If you are looking for... Start with Why
the programme map Five Masters Core foundation papers and their latest Zenodo Concept-DOIs
the mathematical classification layer masters/zeta-zoo/ SGE taxonomy, UCU, and zeta-family status boundaries
the RFEP / Pattern A foundation masters/spectrum-duality/ Renormalized Free-Energy Principle, DS1-DS3, and physical normal form
numerical reproducibility assets Numerical Validation Scripts Script index for CCM, K41, Yang-Mills, Navier-Stokes, dark-energy, BSD, Hodge, and SAT diagnostics
machine-readable repository context llms.txt Search phrases, scope boundaries, DOI anchors, and disambiguation notes

This is a research-source repository, not an installable software package. Claim levels vary by paper and folder: some entries are published Zenodo records, some are public guardrail candidates ahead of Zenodo, and several domain supplements remain explicitly conditional or open at the named bridge step.

Discovery Context

Use the canonical GitHub path research-line/functional-stability-theory when linking this repository. Broad web searches for "functional stability theory" also collide with control-theory, Lyapunov, and engineering literature, while FST-specific records surface through GitHub, Zenodo-linked scholarly indexes, and topic pages. Useful search phrases:

  • research-line functional-stability-theory
  • Functional Stability Theory RFEP GitHub
  • Functional Stability Theory Renormalized Free-Energy Principle
  • FST Spectrum Duality RFEP Zenodo
  • Zeta Zoo SGE taxonomy Functional Stability Theory
  • Spectral Zookeeper CCM microcluster closure

When citing, prefer the Concept-DOIs below for paper branches and this repository URL for source files, scripts, and public reproducibility context.

The Five Masters

The programme rests on five CoreCore foundation papers. Concept DOIs identify versioned Zenodo records and resolve to the latest version; cite a version-specific record DOI when a fixed release matters.

Master Title Role Concept-DOI
Zookeeper The Spectral Zookeeper Conditional RH reduction via CCM microcluster closure 10.5281/zenodo.19673126
Zeta Zoo The Zeta Zoo — The Mathematical Side of FST Classification (SGE taxonomy, Boundary Theorem) 10.5281/zenodo.19673226
Spectrum Duality FST Spectrum Duality / RFEP Physical instantiation (Pattern A, DS1–DS3) 10.5281/zenodo.19036190
Atlas Dirichlet Character Atlas Micro-cartography (Galerkin diagnostics; negative method validation) 10.5281/zenodo.19960809
Selberg NE-B Failure as Hilbert–Pólya Detection SGE-YES validation (v2.0 universality on Selberg zeta) 10.5281/zenodo.19962588

Zookeeper is a conditional reduction, not an unconditional RH proof. Imported CCM inputs and the open internal microcluster/endgame and Even Dominance assumptions are described in the paper; see the v1.6 record.

Atlas + Selberg form the method-validation pair: Atlas is the negative test (leading-order Galerkin diagnostics fall short for Dirichlet characters), Selberg is the positive test (v2.0 reproduces a classical operator-based result on Selberg zeta).

Domain Supplements

FST-Mathematics

Classified by the SGE taxonomy from the Zeta Zoo. These instantiate Pattern A on number-theoretic and algebraic structures. BSD, Hodge, and P vs NP are bridge species — they appear in both the mathematical and physical branches of the programme.

Paper Version Status Open Problem Concept-DOI
BSD v1.4 Maintenance release; rank ≤ 1 verified; no new proof claim Higher Gross–Zagier (rank ≥ 2) 10.5281/zenodo.19087443
Hodge v1.3 candidate Easy Direction + AP=AbsHodge Hard Direction beyond Deligne 10.5281/zenodo.19087439
P vs NP v1.5 Reformulation Uniformity Bridge 10.5281/zenodo.19056809

FST-Physics

Derive Pattern A + DS1–DS3 from Spectrum Duality. These instantiate the Dissipative Selection Principle on physical systems.

Paper Version Status Open Problem Concept-DOI
K41 Variational Minimiser v1.3 Unique energy minimizer within the stated K41-normalized joint variational problem Scope beyond the stated minimization assumptions 10.5281/zenodo.20131305
Turbulence / DFC Cascade v1.8 Conditional companion; DFC hierarchy is an input. Sabra numerical evidence is under review after Issue #1; corrected-flux reruns are not yet reported DFC projection bridge 10.5281/zenodo.19056813
Yang–Mills v2.6 Conditional; continuum mass-gap step remains conditional Volume-independent local transfer gap; analytical RG contraction 10.5281/zenodo.19087433
Navier–Stokes v2.6 Conditional; strict-review wording retained Assumption G2 (projection regularity) 10.5281/zenodo.19087449
NS Log-Distance v1.6 Proof of life / diagnostic bridge TLL for 3D NS analytically open 10.5281/zenodo.19056807

FST-Cosmology

The cosmological branch of FST. The Dark Energy paper studies a reduced scalar variational model; its cosmological and Hu–Sawicki interpretations remain conditional.

Paper Version Status Open Problem Concept-DOI
Dark Energy v1.12 Corrective preprint; reduced-model core only RG matching, stable scalar history, source-bound Hu–Sawicki profile, official likelihood all open 10.5281/zenodo.19036235

Status provenance (local package index, 2026-08-08). The version, status, and open-problem labels above are read from the linked public package READMEs where they exist: BSD v1.4 (record 10.5281/zenodo.20671962), K41 v1.3 (record 10.5281/zenodo.20562341), Turbulence v1.8 (record 10.5281/zenodo.21312807), Yang–Mills v2.6 (record 10.5281/zenodo.20716608), and Navier–Stokes v2.6 / NS-LDI v1.6 (records 10.5281/zenodo.20674952 / 10.5281/zenodo.20773609). Spectrum Duality remains v1.9 live with a local v1.10 candidate, not a v1.10 release. The Dark Energy row was updated independently on 1 October 2026 to the verified corrective v1.12 record; the paper-specific README states the open gates. Hodge and P vs NP remain at the candidate/reformulation boundaries shown above because no newer local release marker was found.

FST-Biology

The standalone chaperone game-theory paper is published: FST-Nash — Game-Theoretic Diagnostics for Chaperone Systems (DOI: 10.5281/zenodo.20402751). Code and results: research-line/fst-nash. The overview paper FST-III Biological Stability is in applications/fst-iii-biological/.

FST-Chemistry

Planned. See fst-chemistry/.

Glossary — FST core terms

Term Meaning
v2.0 Method package in the RH programme (Trilogy v2.1, 10.5281/zenodo.19035640): proposes a conditional reduction of RH to even dominance of the Weil quadratic form QW_λ using Shift Parity, frontier-prime dominance, NE-A, and NE-B; the required closure assumptions remain open.
NE-A Non-existence theorem A. The Fourier multiplier of the prime shift operator A_λ on the critical line is non-positive — cannot serve as a Hilbert–Pólya operator.
NE-B Finite-truncation result: the computer-assisted result excludes non-scalar symmetric operators commuting with every D_N(r) in the tested prime-shift class for N ≤ 15; the identity commutes trivially. Extension to the full space remains open.
SGE Semigroup–Group Equivalence. Classification axis of the Zeta Zoo: HP-BL-YES (commuting operator exists, e.g. Selberg/Casimir), HP-BL-NO (Riemann prime-shift class, conditional on NE-B-full), HP-BL-OPEN (unresolved, e.g. Prime-Hub).
Weil quadratic form QW_λ Truncated explicit-formula quadratic form whose positivity controls zero locations. Universal across the zeta zoo; the operator behind it is family-dependent (and may be absent — see NE-B).
Hilbert–Pólya The classical conjecture asks whether the Riemann zeros are eigenvalues of a self-adjoint operator. Finite NE-B concerns the tested prime-shift class and does not rule out every possible Hilbert–Pólya operator; the even-dominance route is conditional.
Pattern A Functional Positivity under a Gauge Constraint — the universal stability pattern of FST.
RFEP Renormalized Free-Energy Principle. Mathematical core principle of FST; supplies DS1–DS3.
CCM Connes–Consani–Moscovici. Fourier model for the Weil quadratic form used in the conditional Zookeeper reduction.
UCU Universal Convexity Uniqueness lemma. Together with SGE and Weil, the trinity of meta-principles governing the zeta-type branch.

Proof Architecture

flowchart TD
    subgraph MASTERS["Five Core Master Foundations"]
        ZK["Zookeeper<br/><i>Conditional RH reduction via CCM</i>"]
        ZZ["Zeta Zoo<br/><i>SGE Taxonomy & Classification</i>"]
        SD["Spectrum Duality<br/><i>RFEP & Pattern A</i>"]
        AT["Atlas<br/><i>Dirichlet Cartography (Negative Test)</i>"]
        SB["Selberg<br/><i>SGE-YES Method Validation</i>"]
    end

    subgraph DOMAINS["Domain Supplements & Applications"]
        MATH["FST-Mathematics<br/>(BSD, Hodge, P vs NP)"]
        PHYS["FST-Physics<br/>(K41, Turbulence, YM, NS)"]
        COSMO["FST-Cosmology<br/>(Dark Energy / CRM)"]
        BIO["FST-Biology<br/>(FST-Nash Chaperones)"]
    end

    ZK --> MATH
    ZZ --> MATH
    SD --> PHYS
    SD --> COSMO
    SD --> BIO
    AT -.- ZK
    SB -.- ZK

    classDef master fill:#1f2937,stroke:#6366f1,stroke-width:2px,color:#fff;
    classDef domain fill:#111827,stroke:#10b981,stroke-width:1.5px,color:#fff;
    class ZK,ZZ,SD,AT,SB master;
    class MATH,PHYS,COSMO,BIO domain;
Loading

Theoretical Data Flow & Validation Sequence

flowchart LR
    subgraph HYP["1. Mathematical Axioms & Normal Forms"]
        RFEP["Renormalized Free-Energy Principle (RFEP)"]
        PAT_A["Pattern A: Functional Positivity under Gauge Constraint"]
        DS["Dissipative Selection Principles (DS1–DS3)"]
    end

    subgraph PROOF["2. Master Foundations & Proofs"]
        ZK["Zookeeper (CCM Microcluster Closure)"]
        ZZ["Zeta Zoo (SGE Taxonomy & UCU)"]
        VAL["Method-Validation Pair (Atlas / Selberg)"]
    end

    subgraph INST["3. Domain Instantiations"]
        MATH["FST-Mathematics (BSD, Hodge, P vs NP)"]
        PHYS["FST-Physics (K41, Turbulence, YM, NS)"]
        COSMO["FST-Cosmology (Hu–Sawicki / Dark Energy)"]
        BIO["FST-Biology (FST-Nash Chaperones)"]
    end

    subgraph DIAG["4. Local Numerical Validation (Zero-Egress)"]
        SCRIPTS["Python Numerical Diagnostics (scripts/)"]
        RESULTS["Reproducibility & Verification Metrics"]
    end

    HYP --> PROOF
    PROOF --> INST
    INST --> DIAG

    classDef hyp fill:#1e1b4b,stroke:#818cf8,stroke-width:1.5px,color:#fff;
    classDef proof fill:#1f2937,stroke:#6366f1,stroke-width:2px,color:#fff;
    classDef inst fill:#111827,stroke:#10b981,stroke-width:1.5px,color:#fff;
    classDef diag fill:#064e3b,stroke:#34d399,stroke-width:1.5px,color:#fff;
    class RFEP,PAT_A,DS hyp;
    class ZK,ZZ,VAL proof;
    class MATH,PHYS,COSMO,BIO inst;
    class SCRIPTS,RESULTS diag;
Loading

Numerical Validation Lifecycle

sequenceDiagram
    autonumber
    actor Researcher as Theoretical Researcher / Auditor
    participant Core as FST Axioms (RFEP & Pattern A)
    participant Master as Master Foundation (Zookeeper/CCM)
    participant Domain as Domain Constraint Ledger (e.g. YM, NS, K41)
    participant Script as Zero-Egress Local Script (scripts/)
    participant Ledger as Deterministic Verification Ledger

    Researcher->>Core: Formulate Variational Principle & Gauge Constraint
    Core->>Master: Derive Operator Normal Form / Shift-Parity Structure
    Master->>Domain: Instantiate Domain Hypothesis & Transfer Matrix
    Domain->>Script: Execute Local Python Diagnostics (numpy/scipy)
    Note over Script: 100% Offline / Zero-Egress Execution
    Script->>Script: Compute Finite Outer-Gap & Coercive Residuals
    Script->>Ledger: Output Bit-for-Bit Deterministic Verification Certificate
    Ledger-->>Researcher: Validate Reproducibility & Mathematical Invariants
Loading

Governance & Runtime Invariants

The functional-stability-theory repository enforces ten fundamental runtime, security, and research governance invariants:

# Invariant Dimension Guarantee & Contract Specification Verification Method
01 100% Local-First & Zero-Egress All numerical diagnostics, simulation scripts, and tests execute completely offline. Zero telemetry, tracking, or network calls. Strict offline testing; CI matrix isolation
02 Unprivileged Execution (RunAsInvoker) All scripts and tools run strictly in unprivileged user-mode. Root or administrative elevation is never required or invoked. Environment audit; unprivileged test suites
03 Deterministic Reproducibility Numerical assertions and validation ledgers yield deterministic, bit-for-bit reproducible outcomes across all supported platforms. Pytest test suite (110+ passed tests); seeded PRNGs
04 Claim-Level Disambiguation Zookeeper is a conditional RH reduction with imported inputs and open internal closure assumptions; claim levels are stated per paper. README status tables; preprint classification headers
05 Fail-Closed Ledger Gatekeeping Numerical verification scripts reject circular, degenerate, or ill-conditioned inputs immediately (fail-closed) rather than returning ambiguous approximations. Exception assertions; bad-scale and Gribov controls
06 Versioned Zenodo Records Concept DOIs identify version chains; cite a version-specific DOI for a fixed release. Zenodo version records
07 Multi-OS Platform Parity Scripts, LaTeX builds, and test harnesses deliver bit-identical mathematical logic across Windows, Linux, and macOS. GitHub Actions CI multi-OS matrix (ci.yml)
08 Cloud-Sync Conflict Hardening Repository ignore rules prevent cloud-sync conflict files (*-conflict-*, *.sync-temp-*) and multi-agent lock contention (LOCK.*). .gitignore inspection; automated contract tests
09 Transparent Diagnostic Floor Unconditional positive controls (e.g., 2D U(1) character expansion) are segregated from unproven continuum transfer hypotheses. Dedicated positive/negative control scripts
10 48h Security & 5-Day Triage SLA Security anomalies, supply-chain vulnerabilities, and code integrity concerns are acknowledged within 48 hours and triaged within 5 business days. Formal commitment in SECURITY.md

Proof Architecture (ASCII Overview)

                              FIVE MASTERS
   ┌────────────────┬────────────────┬─────────────────┬────────────────┐
   │                │                │                 │                │
Zookeeper       Zeta Zoo      Spectrum Duality      Atlas           Selberg
(RH reduc.)  (Classification)   (Pattern A,      (Dirichlet,        (NE-B
              SGE / UCU /        DS1–DS3,         negative           failure;
              Weil QW_λ)         RFEP)            method test)       SGE-YES
   │                │                │                 │                │
   │       FST-Mathematics       FST-Physics       method-validation pair
   │                │                │
   │        ┌───────┼───────┐  ┌─────┼─────┐
   │        │       │       │  │     │     │
   │      BSD†    Hodge†  PvNP†  TU   YM   NS
   │                                       │
   │                              FST-Cosmology
   │                                       │   NS-LDI
   │                                      DE
   │
Zookeeper: CONDITIONAL RH REDUCTION (CCM route)
† = bridge species (math + physics)

Hierarchy

FST (Functional Stability Theory)
│
├── Masters
│   ├── Zookeeper          Conditional RH reduction (CCM microcluster closure)
│   ├── Zeta Zoo           Mathematical classification (SGE taxonomy)
│   ├── Spectrum Duality   Physical instantiation (RFEP, Pattern A)
│   ├── Atlas              Micro-cartography of Dirichlet (negative method test)
│   └── Selberg            SGE-YES method validation (positive)
│
├── FST-Mathematics        BSD, Hodge, P vs NP
├── FST-Physics            Turbulence, Yang–Mills, Navier–Stokes, NS-LDI
├── FST-Cosmology          Dark Energy
├── FST-Biology            (in development)
└── FST-Chemistry          (planned)

Chronological Development

2025/2026  CRM I–IV (dark energy)     Conditional RH route (even dominance)
           developed independently    developed independently
                 \                       /
                  +---------+---------+
                            |
                  Recognition: both share the same
                  structural pattern (Pattern A)
                            |
                            v
                  RFEP formulated (general principle)
                            |
                  Several dead ends
                            |
                            v
                  Idea: classify zeta-type families
                  using techniques from the RH programme
                            |
                  Not enough — need deeper tools
                            |
                            v
        RH via Connes framework (CCM)
        microcluster closure → conditional reduction
                            |
                            v
                  Zeta Zoo opens: SGE taxonomy
                  classifies all zeta families
                            |
                            v
        Atlas (Dirichlet, negative) + Selberg (SGE-YES, positive)
        method-validation pair completed
                            |
                            v
                  CoreCore expanded to FIVE Masters
                  (Zookeeper, Zeta Zoo, Spectrum Duality,
                   Atlas, Selberg) + domain supplements

Core Foundations — Principles and Naming

Level Name Acronym Meaning Concept-DOI
Programme Functional Stability Theory FST The programme name (umbrella over all) —
Principle Renormalized Free-Energy Principle RFEP The mathematical core principle 10.5281/zenodo.19036190
Pattern Pattern A: Functional Positivity under Gauge Constraint Pattern A The universal stability pattern 10.5281/zenodo.19036190

Independent Foundations

Name Role Concept-DOI
RH Even Dominance v2.1 (Trilogy, Part I-III) Independent conditional RH reduction, second route 10.5281/zenodo.19035640
RH Direct Proof (Even Dominance) Historical title; conditional frontier-dominance route with open analytical assumptions 10.5281/zenodo.19764771
CRM Cosmology (I–V) Independent dark energy model 10.5281/zenodo.18728935

These stand independently of FST. The RFEP was abstracted from them; they are not derived from it.

Numerical Validation Scripts

Script Paper Description
masters/zookeeper/scripts/ Zookeeper CCM microcluster-closure reproducibility pipeline; compact outputs in masters/zookeeper/results/
scripts/k41/compute_F_spectrum.py K41 Variational Minimiser K41 as unique minimiser of F[E]; strict convexity test
scripts/turbulence/compute_goy_shell_dfc.py Turbulence / DFC Cascade Sabra/GOY shell-model DFC1/DFC2 verification and result plot
scripts/yang-mills/compute_dobrushin_su2.py Yang-Mills SU(2) lattice Dobrushin influence scan and gap plot
scripts/yang-mills/compute_birkhoff_rg.py Yang-Mills Birkhoff contraction scan for hierarchical RG steps
scripts/yang-mills/compute_coercive_complement_ledger.py Yang-Mills Finite outer-gap and residual/gap gate with bad-scale and Gribov matched controls
scripts/yang-mills/compute_os_capacity_ledger.py Yang-Mills OS-danger capacity ledger and negative-control diagnostic
scripts/yang-mills/compute_rp_os_transfer_ledger.py Yang-Mills RP/OS transfer matrix positivity ledger
scripts/yang-mills/compute_rp_os_rfep_transfer_ledger.py Yang-Mills RFEP transfer matrix diagnostic ledger
scripts/yang-mills/compute_u1_2d_strong_coupling_positive_control.py Yang-Mills 2D U(1) strong-coupling positive control ledger
scripts/yang-mills/compute_ym_waisen_transfer_ledger.py Yang-Mills Yang-Mills waisen transfer verification ledger
scripts/yang-mills/u1_strong_coupling_positive_control.py Yang-Mills Direct U(1) character expansion positive control script
scripts/navier-stokes/compute_ds3_lorenz.py Navier-Stokes DS3 stress test on Lorenz attractor; TV saturation
scripts/navier-stokes/compute_bv_selection.py Navier-Stokes Balanced-viscosity selection test on the Lorenz attractor
scripts/navier-stokes/compute_bv_multi_attractor.py Navier-Stokes BV-selection stress test on Lorenz, Roessler, and Chen attractors
scripts/navier-stokes/compute_mu_reach.py Navier-Stokes Measure-theoretic reach scan on Lorenz and KS attractors
scripts/navier-stokes/compute_tll_ldi_lorenz.py NS-LDI Proof of Life: TLL+LDI on Lorenz attractor (5/5 tests)
scripts/navier-stokes/compute_tll_ldi_ks.py NS-LDI TLL+LDI diagnostics and grid refinement on the KS attractor
scripts/dark-energy/compute_w_vs_desi.py Dark Energy w_eff(z) comparison with DESI constraints
scripts/dark-energy/compute_w_mapping.py Dark Energy Correct w_eff → w_DE mapping + DESI grid scan
scripts/dark-energy/compute_husawicki_mcmc.py Dark Energy Hu-Sawicki f(R) MCMC fit against DESI+Planck+Cassini
scripts/bsd/compute_height_saturation.py BSD Height saturation test for quadratic twists
scripts/bsd/compute_bsd_verification.py BSD BSD formula sanity checks for selected LMFDB curves
scripts/bsd/compute_rank2_lmfdb.py BSD Rank-2 regulator positivity sample and plot
scripts/hodge/compute_ghr_spectrum.py Hodge GHR spectrum numerical verification
scripts/hodge/compute_voisin_test.py Hodge Voisin-style negative-control stress test
scripts/p-vs-np/compute_sat_entropy.py P vs NP SAT slice-entropy experiment and result plot at the 3-SAT phase transition
scripts/zeta-zoo/dedekind_ne_b_test.py Zeta Zoo Dedekind Q(sqrt(-5)) NE-B analog probe
scripts/zeta-zoo/ihara_petersen_sge_test.py Zeta Zoo Ihara/Petersen SGE YES-side test
scripts/zeta-zoo/sge_control_experiment.py Zeta Zoo SGE YES/NO discriminating control experiment
masters/atlas/scripts/ Atlas Galerkin computation pipeline (35 scripts: basis, κ-grid, asymptotic scans, χ-specific tests)

Repository Structure

functional-stability-theory/
├── masters/                      Five CoreCore foundation papers
│   ├── zookeeper/                Conditional RH reduction (microcluster closure)
│   ├── zeta-zoo/                 Classification (SGE taxonomy)
│   ├── spectrum-duality/         Physical axioms (RFEP, Pattern A)
│   ├── atlas/                    Dirichlet micro-cartography (negative method test)
│   └── selberg/                  NE-B failure as HP detection (SGE-YES validation)
├── fst-mathematics/              Domain supplements — Mathematics
│   ├── bsd/                      Rank-1 positivity (reformulation)
│   ├── hodge/                    No-go + easy direction
│   └── p-vs-np/                  Witness entropy gap (reformulation)
├── fst-physics/                  Domain supplements — Physics
│   ├── k41-variational-minimiser/ K41 energy minimiser (stated joint problem)
│   ├── turbulence/               DFC/anomalous-dissipation companion
│   ├── yang-mills/               Mass gap (conditional)
│   └── navier-stokes/            Regularity + NS-LDI (conditional)
├── fst-cosmology/                Domain supplements — Cosmology
│   └── dark-energy/              CRM screening (conditional, not Cassini-verified)
├── fst-biology/                  Domain supplements — Biology (in development)
├── fst-chemistry/                Domain supplements — Chemistry (planned)
└── scripts/                      Numerical validation (per-paper subdirectories)

Ecosystem & Sibling Research Repositories

functional-stability-theory is the central theoretical hub of the research-line initiative and connects across the open-bricks open science and toolchain ecosystem:

Repository / Package Focus / Domain Integration
research-line/fst-nash Chaperone Game Theory FST-Biology standalone companion (DOI: 10.5281/zenodo.20402751)
research-line/rh-even-dominance Number Theory Riemann Hypothesis even-dominance trilogy foundation
research-line/crm-cosmology Cosmology Cooperative Renormalization Model foundation
research-line/prompt-archaeology-casestudy2 AI & Epistemology 4-Stage prompt archaeology & reproducibility artifacts
research-line/ai-elite-swr AI & Society AI elite structures & social welfare research
research-line/economic-sanctions-coercive-diplomacy Political Economy Game-theoretic model of sanctions and coercive bargaining
biotec-line/VFDistiller Bio-Genetics Pipeline Variant effect predictor & VCF distillation toolchain
doc-bricks/MediaBrain Multi-Format Document Synthesis Offline-first knowledge repository and research indexing engine
dev-bricks/CodeBox Code Analysis & Diagnostics Syntax tree inspection & structural linting environment
dev-bricks/DevCenter Developer Tooling Unified developer dashboard and workspace management
dev-bricks/githubbot Fleet Governance Automation Automated repository hygiene, multi-org sync & CI gatekeeping
ellmos-ai/skills Multi-Agent Execution Fabric Formalized AI cognitive skill library & modular workflow specs
ellmos-ai/sqlite-transit-sync Data Transit Deterministic snapshot retention and sync engine
ellmos-ai/ellmos-development-system AI Development Environment Full-stack agentic runtime environment & MCP orchestration
open-bricks/governance Open Source Governance Cross-organizational policy framework, security disclosure & license standards
open-bricks Umbrella Ecosystem Open source & open science federation

Target Personas & Discoverability

functional-stability-theory serves four core academic and computational research personas across mathematics, physics, and autonomous scientific discovery:

Persona Core Research Question & Challenge How FST Solves It Architectural Value
Theoretical Physicists & Field Theorists Identifying consistent non-perturbative stability mechanisms for Yang-Mills mass gap, Navier-Stokes regularity, and turbulent anomalous dissipation Unifies dissipative selection under the Renormalized Free-Energy Principle (RFEP) and Pattern A (Functional Positivity under Gauge Constraint) Single universal normal form across gauge theory, fluid mechanics, and cosmological screening
Analytic Number Theorists & Millennium Researchers Bypassing structural no-go theorems (NE-A/NE-B) in operator-theoretic approaches to the Riemann Hypothesis Introduces the SGE taxonomy (Zeta Zoo) and v2.0 even-dominance of the Weil quadratic form, linking microcluster closure (Zookeeper) with Selberg validation Conditional framework with explicit open analytic steps
Open-Science Curators & Formal Verification Reviewers Validating sweeping mathematical claims against reproducible, air-gapped code and version-stable artifacts Provides 100% offline, zero-egress numerical validation scripts, deterministic CSV/JSON ledgers, and CERN/Zenodo Concept-DOIs Bit-for-bit verifiable computational evidence with transparent claim-level boundary tagging
AI Research Agents & Literature Synthesizers Disambiguating specialized mathematical stability theory from generic control engineering (Lyapunov) and software test suites Publishes structured llms.txt, PEP 621 metadata URLs, semantic search phrases, and explicit negative controls High-precision LLM retrieval without hallucinations or domain cross-contamination

Comparative Matrix vs. Alternatives

The following invariant-mapped benchmark contrasts the Functional Stability Theory (FST) framework with four prevalent paradigms across theoretical physics, analytic number theory, and scientific computing:

Invariant Dimension FST (research-line) Classical Number Theory Connes Noncommutative Geometry Traditional CFD Simulation Closed Math Suites (Wolfram/MATLAB)
01. Universal Substrate RFEP / Pattern A (Universal normal form) Ad-hoc single problems Adèle class space trace formula Navier-Stokes discretization (DNS/LES) Proprietary black-box routines
02. Hilbert–Pólya Status Conditional even-dominance route; finite NE-B obstruction No general exclusion established here Analytic continuation obstacles Not applicable Not applicable
03. Zero-Egress Reproducibility 100% Offline Python Ledgers (Deterministic) Rare / Paper-only Purely theoretical / Paper Cluster / HPC dependent Cloud license / Phone-home required
04. Claim-Level Disambiguation Strict (Theorem / Cond. / Open markers) Often informal Highly complex / Implicit Heuristic / Empirical Closed vendor documentation
05. Scholarly Provenance Zenodo Concept-DOI version chain; cite a version-specific DOI for fixed citations Journal / ArXiv ArXiv / Monograph Conference / Journal Closed vendor build versions
06. Open Source License CC-BY-4.0 (100% Permissive) Proprietary / ArXiv Copyrighted monograph Often GPL / Commercial Proprietary commercial licensing
07. Third-Party Supply Chain 100% Permissive Audited SBOM (0% Copyleft) N/A N/A Unaudited legacy toolchains Closed binary blobs
08. AI & LLM Readiness llms.txt & PEP 621 Metadata Standards Unstructured Non-machine-readable Non-structured Restricted closed APIs
09. Cross-Platform Parity Win / Linux / macOS (CI Matrix verified) N/A Neutral (Textual) Mostly Linux HPC specific OS-specific installer / dongle
10. Security & SLA Assurance 48h Response / 5-Day Triage SLA Informal Informal Informal Vendor helpdesk / No SLA

Third-Party Licenses & Transparency

functional-stability-theory enforces a strict open-science and permissive open-source supply chain:

  • Primary Work License: Creative Commons Attribution 4.0 International (CC-BY-4.0) — unrestricted academic and commercial reuse with attribution.
  • Zero Copyleft: 0% AGPL, GPL, or LGPL components in codebase and verification tooling.
  • 100% Offline Zero-Egress: Validation scripts run completely air-gapped without remote network requests or telemetry.
Component License Role in Programme Supply Chain Status
Python Standard Library PSF-2.0 Core verification logic, math/cmath, hashing & ledgers Audited / Permissive
mpmath (optional) BSD-3-Clause Arbitrary-precision floating-point arithmetic Audited / Permissive
sympy (optional) BSD-3-Clause Symbolic algebra and identity verification Audited / Permissive
numpy (optional) BSD-3-Clause Vectorized numerical linear algebra Audited / Permissive
scipy (optional) BSD-3-Clause Numerical integration and ODE/PDE solvers Audited / Permissive
Development Tools (pytest, ruff, setuptools) MIT / Apache-2.0 Contract testing, static linting & build packaging Audited / Permissive

For the complete software inventory, authoritative license texts, and invariant compliance details, see THIRD_PARTY_LICENSES.md. A bit-accurate, machine-readable plain-text Level 1 SBOM companion is available at THIRD_PARTY_LICENSES.txt.

Security Policy, Author & Statutory Notice

Security & Vulnerability Disclosure

functional-stability-theory enforces a strict zero-egress policy and a formal coordinated vulnerability disclosure workflow. Vulnerability reports receive initial acknowledgment within 48 hours and formal triage within 5 business days. Contact: [email protected] or [email protected]. See SECURITY.md for full policy details. For developer guidelines, Plan D local development workflow, and governance invariants, see CONTRIBUTING.md.

Author & Attribution

Statutory Notice (§ 521 BGB Gefälligkeitsrecht)

Gemäß § 521 BGB (Gefälligkeitsrecht) wird diese wissenschaftliche Forschungssoftware und Quelltextdokumentation unentgeltlich und ohne jede Gewährleistung bereitgestellt. Haftung für Sach- und Rechtsmängel ist auf Vorsatz und grobe Fahrlässigkeit beschränkt. Die theoretischen Theoreme, numerischen Beweis-Ledger und Validierungsskripte dienen ausschließlich akademischen und Open-Science-Zwecken; jede weitergehende Haftung ist im gesetzlich zulässigen Rahmen ausgeschlossen.

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