Repository navigation
Clean up the bibliography, add bibtex-tidy, update "Research" - #17
Merged
philipphennig merged 25 commits intoOct 13, 2026
Merged
Conversation
Keep the JMLR 2013 version and fix its page range.
Keep the published Journal of Computational Physics version.
Its only entry duplicated OHagan1987 in papers.bib.
It pointed to the Wenger et al. paper (2205.15449).
The bib layout only renders the pdf field. Entries whose file field points to PDFs missing from the site are left unchanged for now.
Use one name per conference (full name plus acronym, without "Proceedings of", edition numbers or years), spell out journal names, and write all arXiv preprints as "arXiv preprint arXiv:<id>". Drop volume/issue fields that only repeated the arXiv id or category.
The bib layout only shows the venue for article and inproceedings entries, so these NeurIPS and AISTATS papers showed none.
Point venue, volume, pages, year and link to the published version, keep the arXiv id in an arxiv field (shown as a separate arXiv button), and use the published title where it changed. Also update the title of the still-unpublished meshless methods preprint to its current arXiv title.
Apply the existing end-of-file-fixer and trailing-whitespace pre-commit hooks to all files, so that pre-commit (and pre-commit.ci) passes on the whole repository. No content changes.
Drop the italics from journal and conference venues so all venue lines look alike, and use a slightly darker grey (#666) for authors and venues for better contrast.
Contributor
|
Wow, neat! Thanks again! |
github-actions Bot
added a commit
that referenced
this pull request
Oct 13, 2026
* Add bibtex-tidy pre-commit hook * Tidy BibTeX files with bibtex-tidy * Remove duplicate Hennig & Kiefel quasi-Newton entry Keep the JMLR 2013 version and fix its page range. * Remove arXiv duplicate of the Owhadi & Zhang gamblets paper Keep the published Journal of Computational Physics version. * Remove sampling.bib Its only entry duplicated OHagan1987 in papers.bib. * Fix arXiv link of pfoertner2022linpde It pointed to the Wenger et al. paper (2205.15449). * Rename file to pdf so PDF links are shown The bib layout only renders the pdf field. Entries whose file field points to PDFs missing from the site are left unchanged for now. * Replace missing local PDFs with public links * Add Springer link to MICCAI 2014 tractography paper * Remove arXiv URL from UAI 2017 log-determinant paper * Remove redundant double braces from titles * Normalise venue names Use one name per conference (full name plus acronym, without "Proceedings of", edition numbers or years), spell out journal names, and write all arXiv preprints as "arXiv preprint arXiv:<id>". Drop volume/issue fields that only repeated the arXiv id or category. * Retype conference papers as inproceedings The bib layout only shows the venue for article and inproceedings entries, so these NeurIPS and AISTATS papers showed none. * Update preprints to their published versions Point venue, volume, pages, year and link to the published version, keep the arXiv id in an arxiv field (shown as a separate arXiv button), and use the published title where it changed. Also update the title of the still-unpublished meshless methods preprint to its current arXiv title. * Show booktitle for incollection entries * Fix or remove dead links * Link official open-access PDFs for published papers * Show publisher for book entries * Remove broken code link from probabilistic line search paper * Link NeurIPS page instead of supplement zip for schober2014nips * Update old-format NeurIPS links * Update dead link of Minka's quadrature report * Fix trailing whitespace and final newlines Apply the existing end-of-file-fixer and trailing-whitespace pre-commit hooks to all files, so that pre-commit (and pre-commit.ci) passes on the whole repository. No content changes. * Show venues in plain text and darken author and venue lines Drop the italics from journal and conference venues so all venue lines look alike, and use a slightly darker grey (#666) for authors and venues for better contrast. * Rename the Related research topic to Other [ci skip]
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
2 participants
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
This PR cleans up the BibTeX files behind the research page and adds a formatter so they stay consistent, and also add some minor visual changes to the research page. While the full diff is large, the individual commits are quite atomic and I carefully checked each of them while working on this PR.
Bibtex-related changes, each in an individual commit:
_bibliography/.corrected page range.
sampling.bib, whose only entry duplicated O'Hagan (1987) inpapers.bib.filetopdfso PDF links show up on the site.format.
incollection/proceedingstoinproceedingsso their venues areshown.
a separate link.
incollection).Applying pre-commit also triggered a pre-commit hook that was already present in the repo which fixed trailing whitespace and final newlines across the repository.
In addition, I also slightly changed the research page so that venues are shown in plain text and author and venue names are slightly darker, and I renamed the "Related" research topic to "Other" (matching the original category before my update in #16).