Repositories list

• HetChrom_activation

  Public
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  GNU General Public License v3.0

  •00 forks in RippeLab/HetChrom_activation•00 stars in RippeLab/HetChrom_activation•00 issues in RippeLab/HetChrom_activation•00 pull requests in RippeLab/HetChrom_activation•Updated Aug 9, 2026Aug 9, 2026

• split-flow

  Public
  Jupyter Notebook

  •00 forks in RippeLab/split-flow•11 star in RippeLab/split-flow•00 issues in RippeLab/split-flow•00 pull requests in RippeLab/split-flow•Updated May 10, 2026May 10, 2026

• ecdna-fish-bladder-cancer

  Public
  Analysis of FISH microscopy images for ecDNA detection in bladder cancer

  Jupyter Notebook

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  MIT License

  •00 forks in RippeLab/ecdna-fish-bladder-cancer•00 stars in RippeLab/ecdna-fish-bladder-cancer•00 issues in RippeLab/ecdna-fish-bladder-cancer•00 pull requests in RippeLab/ecdna-fish-bladder-cancer•Updated Apr 30, 2026Apr 30, 2026

• RWireX

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  MIT License

  •11 fork in RippeLab/RWireX•1111 stars in RippeLab/RWireX•00 issues in RippeLab/RWireX•00 pull requests in RippeLab/RWireX•Updated Jan 22, 2026Jan 22, 2026

• ACDC-Microscopy

  Public
  Collection of scripts used for Preprocessing and Analysis of padFISH and Immunofluorescence (IF) data sets in the study "Two different chromatin modules regulat…

  Jupyter Notebook

  •00 forks in RippeLab/ACDC-Microscopy•00 stars in RippeLab/ACDC-Microscopy•00 issues in RippeLab/ACDC-Microscopy•00 pull requests in RippeLab/ACDC-Microscopy•Updated Dec 15, 2025Dec 15, 2025

• padFISH

  Public
  Collection of scripts used for Preprocessing of and analysis of padFISH data sets

  Jupyter Notebook

  •00 forks in RippeLab/padFISH•11 star in RippeLab/padFISH•00 issues in RippeLab/padFISH•00 pull requests in RippeLab/padFISH•Updated Dec 3, 2025Dec 3, 2025

• MBEN

  Public
  Jupyter Notebook

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  GNU Affero General Public License v3.0

  •00 forks in RippeLab/MBEN•33 stars in RippeLab/MBEN•00 issues in RippeLab/MBEN•00 pull requests in RippeLab/MBEN•Updated May 8, 2025May 8, 2025

• MLL-EDC4

  Public
  00 forks in RippeLab/MLL-EDC4•00 stars in RippeLab/MLL-EDC4•00 issues in RippeLab/MLL-EDC4•00 pull requests in RippeLab/MLL-EDC4•Updated Oct 23, 2023Oct 23, 2023

• TurboATAC

  Public
  HTML

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  MIT License

  •00 forks in RippeLab/TurboATAC•00 stars in RippeLab/TurboATAC•00 issues in RippeLab/TurboATAC•00 pull requests in RippeLab/TurboATAC•Updated Sep 13, 2023Sep 13, 2023

• RWire-IFN

  Public
  Scripts for co-regulation analysis of scATAC-seq data

  R

  •00 forks in RippeLab/RWire-IFN•00 stars in RippeLab/RWire-IFN•00 issues in RippeLab/RWire-IFN•00 pull requests in RippeLab/RWire-IFN•Updated Jan 31, 2023Jan 31, 2023

• NSSQ

  Public
  Spot segmentation and quantification on fluorescence microscopy images

  00 forks in RippeLab/NSSQ•00 stars in RippeLab/NSSQ•00 issues in RippeLab/NSSQ•00 pull requests in RippeLab/NSSQ•Updated Mar 15, 2022Mar 15, 2022

• NSQFRAP

  Public
  Quantification of FRAP experiments of binding site clusters

  00 forks in RippeLab/NSQFRAP•00 stars in RippeLab/NSQFRAP•00 issues in RippeLab/NSQFRAP•00 pull requests in RippeLab/NSQFRAP•Updated Mar 15, 2022Mar 15, 2022

• RRMM

  Public
  Data analysis scripts for scRNA-seq analysis of relapsed and refractory multiple myeloma

  HTML

  •22 forks in RippeLab/RRMM•1010 stars in RippeLab/RRMM•00 issues in RippeLab/RRMM•00 pull requests in RippeLab/RRMM•Updated Sep 27, 2021Sep 27, 2021

• ALT-FISH

  Public
  Script collection for the automated analysis of ALT-FISH image data.

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  •00 forks in RippeLab/ALT-FISH•00 stars in RippeLab/ALT-FISH•00 issues in RippeLab/ALT-FISH•00 pull requests in RippeLab/ALT-FISH•Updated Jun 7, 2021Jun 7, 2021

• Chromocenters

  Public
  R

  •00 forks in RippeLab/Chromocenters•00 stars in RippeLab/Chromocenters•00 issues in RippeLab/Chromocenters•00 pull requests in RippeLab/Chromocenters•Updated May 12, 2021May 12, 2021

• Optodroplets

  Public
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  •11 fork in RippeLab/Optodroplets•00 stars in RippeLab/Optodroplets•00 issues in RippeLab/Optodroplets•00 pull requests in RippeLab/Optodroplets•Updated May 5, 2021May 5, 2021