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Using Random Forest to predict the presence of heart disease

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Random Forest

Using Random Forest to predict the presence of heart disease. See RandomForestClassifier documentation from scikit-learn.

About

With Random Forest, it is important to avoid overfitting and maximize out-of-sample accuracy by optimizing the model's hyperparameters. The following parameters are optimized in this example:

  • n_estimators
  • max_depth
  • max_features

The following optimization techniques are used:

  • OOB error reduction
  • grid search with 10-folds cross validation

The following feature importance techniques are used:

  • Gini impurity
  • Permutation feature importance

Installation

Data

The heart disease dataset from Kaggle is utilized

Results

Using the following parameters:

  • n_estimators = 90
  • max_depth = 2
  • max_featres = 'sqrt'

An in-sample F1 score of 88.81% and an out-of-sample F1 score of 88% are obtained. With any machine learning model, ideally you hope to obtain an in-sample accuracy a bit better than an out-of-sample accuracy. That way, you know your model is neither over nor underfit. Use these criteria, the modeling project was a success.

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Using Random Forest to predict the presence of heart disease

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