Issues

• Train model in Fast-Higashi and impute in Higashi with a much higher resolution

  ma-compbio/Higashi#67 · Filter by author ypauling opened on Jan 19, 2026

• TADs Boundary

  ma-compbio/Higashi#66 · Filter by author Accompany0313 opened on Jun 17, 2025

• call TADs

  ma-compbio/Higashi#58 · Filter by author Accompany0313 opened on Nov 25, 2024
  1

• impute some of these cells with the trained model

  ma-compbio/Higashi#57 · Filter by author Accompany0313 opened on Sep 15, 2024
  1

• RuntimeError: received 0 items of ancdata

  ma-compbio/Higashi#48 · Filter by author PeiKeGUO opened on Mar 22, 2024
  1

• Stop with OSError when run "higashi_model.train_for_imputation_nbr_0()"

  ma-compbio/Higashi#42 · Filter by author yufanzhouonline opened on Aug 4, 2023
  6

• What are the configure options mean?

  ma-compbio/Higashi#41 · Filter by author khsjh opened on Jul 24, 2023

• The main_cell.py is so slow

  ma-compbio/Higashi#39 · Filter by author yangfeizZZ opened on Jun 8, 2023
  5

• Error running simulated data

  ma-compbio/Higashi#38 · Filter by author mxw010 opened on May 16, 2023

• higashi.Higashi_backend.Modules import error

  ma-compbio/Higashi#36 · Filter by author bio-xtt opened on May 12, 2023
  5

• Error running Ramani data

  ma-compbio/Higashi#34 · Filter by author mxw010 opened on Apr 25, 2023
  4