Take data-beans 0.7.2; positions never match gene pieces - #9
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…gene pieces A BAF row's first segment is a position (chr:pos). On an alt contig its name has underscores, so a gene query matched one of its pieces; now a position or locus matches only as a whole.
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What
data-beans0.7.2 andlegume-genomic-types0.5.3, which keep a position or locus gene part whole under the shared gene rule.pileup --genesmatching: a row whose gene part is a position or locus (a BAF row'schr:pos) now matches only as a whole. On an alt contig the name has underscores, and the per-piece check let a gene query match one of its pieces.Testing