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cassj
chipseq_pipeline
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Scripts for Buckley Lab ChIPseq pipeline
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.#plot_peaks_to_genes.R
.#plot_peaks_to_genes.R
.gitignore
.gitignore
Capfile
Capfile
README
README
R_setup.R
R_setup.R
compare_peaks.R
compare_peaks.R
create_transcript_db.R
create_transcript_db.R
export2fastq.pl
export2fastq.pl
mm9RDtoGenes.R
mm9RDtoGenes.R
mm9RDtoGenes_toTSS.R
mm9RDtoGenes_toTSS.R
mm9_lengths
mm9_lengths
nearest_nearest.R
nearest_nearest.R
peak_overlap.R
peak_overlap.R
peak_read_counts.R
peak_read_counts.R
peaks2xpn.R
peaks2xpn.R
peaksBed2IRanges.R
peaksBed2IRanges.R
peaksBed2IRanges_SICER.R
peaksBed2IRanges_SICER.R
plot_peaks_to_genes.R
plot_peaks_to_genes.R
pos_to_bed.R
pos_to_bed.R
rd_fetch_mm9_seqs.R
rd_fetch_mm9_seqs.R
read_gene_distribution.R
read_gene_distribution.R
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Scripts for Buckley Lab ChIPseq pipeline
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