Production machine config

This branch contains necessary files and instructions to run and manage bioportal in prodution mode.

Prerequisites

You will need frontend built in production mode.

Instructions

1. Clone this repository to your machine
2. cp ~hostkey.pem ~hostcert.pem /etc/grid-security/ copy your authorized certificates
3. cd server-config/
4. cp /path_to_frontend_directory/dist ./frontend/
5. docker build . -t elixir_portal:latest --no-cache
6. docker run -d --mount type=bind,source=/etc/grid-security,target=/etc/grid-security -p 80:80 -p 443:443 elixir_portal:latest

General

get into docker terminal

docker exec -it $containter_name bash

get running docker containers

docker ps

read gunicorn logs

cat srv/flask_app/be/gunicorn.log