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Clean up empty headings and show QTL names as eQTL, sQTL, caQTL in the side menu - #50

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gaow merged 4 commits into
StatFunGen:mainfrom
jaempawi:cleanup-empty-headings
Oct 9, 2026
Merged

gaow merged 4 commits into
StatFunGen:mainfrom
jaempawi:cleanup-empty-headings

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@jaempawi

@jaempawi jaempawi commented Oct 9, 2026 •

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Follow-up to #49.

  • Removes 7 empty "Path..." headings left after the path cleanup (Bellenguez, ROSMAP PCC eQTL and sQTL, snRNA-seq pseudo-bulk) and adds a pointer to the Synapse IDs under 11 other emptied sections (ROSMAP AC pages and the QTL template). 11 headings that were already empty before Sync staging YAML with Synapse #49 are unchanged.
  • The side menu showed the QTL folders as Eqtl, Sqtl, Caqtl and so on, because Hugo derives the title from the folder name. hugo_generator.py now sets the title to the type in lowercase followed by QTL (eQTL, sQTL, mQTL, pQTL, caQTL, gpQTL, haQTL, metQTL). To check after the deploy: open the QTL section of the site and look at the left menu.

Replaces #51.

@jaempawi jaempawi changed the title Clean up empty headings after path removal Clean up empty headings and show QTL names as eQTL, sQTL, caQTL in the side menu Oct 9, 2026
@gaow
gaow merged commit 835f196 into StatFunGen:main Oct 9, 2026
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2 participants