Issues

• Outdated NumPy

  GilsonLabUCSD/pAPRika#220 · Filter by author jaketanderson opened on Jul 20, 2025

• Percentage VS fraction in restraint dictionaries

  GilsonLabUCSD/pAPRika#218 · Filter by author jaketanderson opened on Jul 14, 2025
  3

  

• IndexError when building restraints

  GilsonLabUCSD/pAPRika#204 · Filter by author lgsmith opened on Nov 21, 2024
  4

• Codacy Code Analysis

  enhancement
  GilsonLabUCSD/pAPRika#203 · Filter by author jaketanderson opened on Sep 7, 2024
  1

• Consider migrating to Data Classes

  enhancement
  GilsonLabUCSD/pAPRika#113 · Filter by author slochower opened on Oct 12, 2019

• [WIP] Additional test cases

  openff
  GilsonLabUCSD/pAPRika#105 · Filter by author slochower opened on May 11, 2019

• Store PMF data for endpoints method

  enhancementhelp wanted
  GilsonLabUCSD/pAPRika#100 · Filter by author nhenriksen opened on Mar 5, 2019
  

• [TODO] Split analysis.py

  enhancement
  GilsonLabUCSD/pAPRika#96 · Filter by author slochower opened on Feb 28, 2019
  2

  

• Possible issue with mbar-block and fractions

  bug
  GilsonLabUCSD/pAPRika#87 · Filter by author slochower opened on Feb 14, 2019
  2

• Reference material for NPT replica exchange

  enhancement
  GilsonLabUCSD/pAPRika#86 · Filter by author nhenriksen opened on Feb 12, 2019
  2

  

• Stop analysis if the topology does not match the trajectories

  bug
  GilsonLabUCSD/pAPRika#72 · Filter by author slochower opened on Aug 8, 2018

• Example uses

  documentation
  GilsonLabUCSD/pAPRika#40 · Filter by author slochower opened on Mar 9, 2018