diff --git a/CHANGELOG.md b/CHANGELOG.md
index 000388a..a3d55db 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -26,6 +26,7 @@ JSON field names and exit codes are part of the public API.
 - `preflight` `single_filament` now fails only when the number of `--slot`s differs from the number of filaments in the plate. Single-filament jobs send the same payload as before.
 
 ### Fixed
+- `slice --set` now preserves JSON list values, including commas inside quoted entries; comma-separated batches and repeated overrides remain supported.
 - `print pause` and `print stop` now verify PAUSE or an idle state before exiting 0; `--wait` defaults to 30s and must be positive.
 - A failed retry cannot reuse a prior successful slice. Every slice verifies its requested filament changes, including an empty change list.
 - Continuous monitoring preserves FAILED/PAUSE outcome codes on timeout and reports final state on interruption. Footprints correspond to plate 1, matching the inspected job and preview.
diff --git a/internal/cmd/settings_test.go b/internal/cmd/settings_test.go
new file mode 100644
index 0000000..3928169
--- /dev/null
+++ b/internal/cmd/settings_test.go
@@ -0,0 +1,79 @@
+package cmd
+
+import (
+	"io"
+	"reflect"
+	"testing"
+
+	"github.com/alecthomas/kong"
+
+	"github.com/voska/bambu/internal/recipe"
+	"github.com/voska/bambu/internal/slicer"
+)
+
+func settingConfigs(t *testing.T, sets []string) *slicer.Configs {
+	t.Helper()
+	var cli CLI
+	parser, err := kong.New(&cli, kong.Writers(io.Discard, io.Discard), kong.Vars{"models": "X1C"})
+	if err != nil {
+		t.Fatal(err)
+	}
+	args := []string{"slice", "part.stl", "--recipe", "prototype-pla"}
+	for _, value := range sets {
+		args = append(args, "--set", value)
+	}
+	if _, err := parser.Parse(args); err != nil {
+		t.Fatal(err)
+	}
+	ix, err := slicer.LoadIndex("../slicer/testdata/resources")
+	if err != nil {
+		t.Fatal(err)
+	}
+	cfg, err := slicer.Build(ix, slicer.Request{Recipe: recipe.Recipe{Process: "0.20mm Standard", Filament: "Bambu PLA Basic"}, MachinePreset: "Test Printer 0.4 nozzle", Plate: "textured_plate", Sets: cli.Slice.Set})
+	if err != nil {
+		t.Fatalf("settings %v: %v", sets, err)
+	}
+	return cfg
+}
+
+func TestSliceSettingLegacyEscapesAndTrailingSeparator(t *testing.T) {
+	for _, sets := range [][]string{{`machine_start_gcode=G28 ; first\,second,wall_loops=4`}, {"wall_loops=4,"}} {
+		cfg := settingConfigs(t, sets)
+		if cfg.Process["wall_loops"] != "4" {
+			t.Fatalf("lost wall override: %v", cfg.Applied)
+		}
+		if len(cfg.Applied) == 2 && cfg.Machine["machine_start_gcode"] != "G28 ; first,second" {
+			t.Fatalf("escaped comma changed: %v", cfg.Applied)
+		}
+	}
+}
+
+func TestSliceSettingJSONEscapes(t *testing.T) {
+	cfg := settingConfigs(t, []string{`nozzle_temperature=["250,260","quoted \"text\"","back\\slash"]`})
+	if !reflect.DeepEqual(cfg.Filaments[0]["nozzle_temperature"], []any{"250,260", `quoted "text"`, `back\slash`}) {
+		t.Fatalf("JSON escapes changed: %v", cfg.Applied)
+	}
+}
+
+func TestSliceSettingScalarBrackets(t *testing.T) {
+	for _, value := range []string{`; [banner`, `; "banner`, `; banner=[text`} {
+		cfg := settingConfigs(t, []string{"machine_start_gcode=" + value + ",wall_loops=4"})
+		if cfg.Machine["machine_start_gcode"] != value || cfg.Process["wall_loops"] != "4" {
+			t.Fatalf("scalar mistaken for JSON: %v", cfg.Applied)
+		}
+	}
+}
+
+func TestSliceSettingListsAndBatches(t *testing.T) {
+	for _, sets := range [][]string{
+		{`nozzle_temperature=["250","250"]`, "wall_loops=4", "sparse_infill_density=30%"},
+		{`nozzle_temperature=["250","250"],wall_loops=4,sparse_infill_density=30%`},
+		{`wall_loops=4,sparse_infill_density=30%,nozzle_temperature=["250","250"]`},
+		{`nozzle_temperature=["250"\,"250"],wall_loops=4,sparse_infill_density=30%`},
+	} {
+		cfg := settingConfigs(t, sets)
+		if !reflect.DeepEqual(cfg.Filaments[0]["nozzle_temperature"], []any{"250", "250"}) || cfg.Process["wall_loops"] != "4" || cfg.Process["sparse_infill_density"] != "30%" {
+			t.Fatalf("overrides lost: %v", cfg.Applied)
+		}
+	}
+}
diff --git a/internal/cmd/slice.go b/internal/cmd/slice.go
index 5ab6317..808d9e4 100644
--- a/internal/cmd/slice.go
+++ b/internal/cmd/slice.go
@@ -22,7 +22,7 @@ type SliceCmd struct {
 	Filament   []string  `short:"f" sep:"none" help:"Filament preset to use instead of the recipe's (e.g. \"Generic PLA\", \"Bambu PLA Matte\"). Repeat once per filament, in print order, for a multi-colour job."`
 	Color      []string  `name:"color" aliases:"colour" sep:"none" placeholder:"RRGGBB" help:"Spool colour per --filament, same order (e.g. FFFFFF). Required with two or more filaments: Bambu Studio sizes the purge between them from the colours."`
 	ChangeZ    []float64 `name:"filament-change-z" sep:"none" placeholder:"Z" help:"The next --filament starts on the first layer above Z mm (the top of the previous filament's last layer); the AMS swaps automatically. Once per filament after the first."`
-	Set        []string  `short:"s" help:"Override a Bambu Studio setting: key=value (repeatable)." placeholder:"KEY=VALUE"`
+	Set        []string  `short:"s" sep:"none" help:"Override a Bambu Studio setting: key=value (repeatable; comma-separated batches and JSON lists supported)." placeholder:"KEY=VALUE"`
 	Name       string    `short:"n" help:"Output base name (default <model>-<recipe>)."`
 	Out        string    `short:"o" help:"Output directory (default: config output_dir, else current dir)." type:"path"`
 	AutoOrient bool      `name:"auto-orient" help:"Let the slicer re-orient the model (default: keep the model's orientation)."`
diff --git a/internal/slicer/settings.go b/internal/slicer/settings.go
new file mode 100644
index 0000000..b4cc7be
--- /dev/null
+++ b/internal/slicer/settings.go
@@ -0,0 +1,63 @@
+package slicer
+
+import "strings"
+
+// splitSets preserves JSON values while retaining Kong's batch and escaped-comma behavior.
+func splitSets(values []string) []string {
+	var out []string
+	for _, value := range values {
+		var token strings.Builder
+		depth := 0
+		quoted, escaped := false, false
+		for i, ch := range value {
+			switch {
+			case escaped:
+				if ch != ',' {
+					token.WriteRune('\\')
+				}
+				token.WriteRune(ch)
+				escaped = false
+				continue
+			case ch == '\\' && i < len(value)-1:
+				escaped = true
+				continue
+			}
+			if quoted {
+				token.WriteRune(ch)
+				if ch == '"' {
+					quoted = false
+				}
+				continue
+			}
+			switch ch {
+			case '"':
+				quoted = depth > 0
+			case '[':
+				if depth > 0 {
+					depth++
+				} else if _, prefix, ok := strings.Cut(token.String(), "="); ok && strings.TrimSpace(prefix) == "" {
+					depth = 1 // a JSON list starts at the beginning of the setting value
+				}
+			case '{':
+				if depth > 0 {
+					depth++
+				}
+			case ']', '}':
+				if depth > 0 {
+					depth--
+				}
+			case ',':
+				if depth == 0 {
+					out = append(out, token.String())
+					token.Reset()
+					continue
+				}
+			}
+			token.WriteRune(ch)
+		}
+		if token.Len() > 0 {
+			out = append(out, token.String())
+		}
+	}
+	return out
+}
diff --git a/internal/slicer/slice.go b/internal/slicer/slice.go
index d5af317..5253878 100644
--- a/internal/slicer/slice.go
+++ b/internal/slicer/slice.go
@@ -157,7 +157,7 @@ func Build(ix *Index, req Request) (*Configs, error) {
 	}
 	apply([]map[string]any{process}, req.Recipe.ProcessOverrides)
 	apply(c.Filaments, req.Recipe.FilamentOverrides)
-	for _, s := range req.Sets {
+	for _, s := range splitSets(req.Sets) {
 		k, v, ok := strings.Cut(s, "=")
 		k, v = strings.TrimSpace(k), strings.TrimSpace(v)
 		if !ok || k == "" {