Skip to content

Latest commit

 

History

History

Folders and files

NameName
Last commit message
Last commit date

parent directory

..
 
 
 
 

README.md

faba design & methods notes

Methods — describes code that exists

doc what it is
profiling-methods.md BAM → per-cell features. DART-seq m6A, A-to-I editing, alternative polyadenylation, gene counts and cell calling, SNP genotyping — the test, the null and the thresholds for each. Also lists where the code and its own --help text disagree.

The annotation and lineage write-ups moved to senna/docs with the subcommands they describe. faba's product is the per-cell feature matrices; everything that reads one and fits a model is senna.