Issues

• notebooks/template_qc.qmd fails without 'alias' column in samplesheet.csv

  KarchinLab/TCRtoolkit#94 · Filter by author kieran-redpath opened on Jul 30, 2026
  1

• Downstream Analysis

  KarchinLab/TCRtoolkit#58 · Filter by author KevinMLanderos opened on Sep 5, 2025

• Notebooks and Downstream Analysis

  KarchinLab/TCRtoolkit#57 · Filter by author KevinMLanderos opened on Sep 5, 2025

• Sample analysis notebook

  KarchinLab/TCRtoolkit#34 · Filter by author dltamayo opened on May 16, 2025
  

• Update script/notebook logging

  KarchinLab/TCRtoolkit#26 · Filter by author dltamayo opened on Apr 24, 2025

• TCR generation probabilities

  KarchinLab/TCRtoolkit#11 · Filter by author RachelKarchin opened on Mar 20, 2025
  7

  

• Overlap analysis notebook #1

  KarchinLab/TCRtoolkit#9 · Filter by author RachelKarchin opened on Mar 20, 2025
  2

  

• Sharing analysis notebook

  KarchinLab/TCRtoolkit#16 · Filter by author dltamayo opened on Feb 28, 2025
  1